Sources¶
The sources for the information used today came from those linked throughout the content.
However, certain sources deserve special highlighting as they were particularly useful in developing this workshop, contain a wealth of related resources, or are especially pertinent at this stage.
- Practical Computing for Biologists book by Haddock and Dunn
- April 2013 Software Carpentry at Arizona
- Bioinf-py At the main site you can select your form.
- Programming: Pick up Python by Jeffrey M. Perkel. Nature. 2015 February 5;518:125–6.doi:10.1038/518125a. PMID: 25653001
- Interactive notebooks: Sharing the code by Helen Shen. Nature. 2014 Nov 6;515(7525):151-2. doi: 10.1038/515151a. PMID: 25373681
- a two year-old screencast intro of IPython notebook by Titus Brown (Skip to the three-minute mark since we aren’t necessarily interested in running it on Amazon web services right now.) A non-interactive version of the notebook he demonstrates is here.
- A hands-on introduction to Python for beginning programmers